<!-- ============================================================= -->
<!--  MODULE:    Article Authoring DTD Over-ride Content and       -->
<!--             Attribute Module                                  -->
<!--  VERSION:   ANSI/NISO JATS Version 1.2d1 (Z39.96-2015)        -->
<!--  DATE:      June 2017                                         -->
<!--                                                               -->
<!-- ============================================================= -->

<!-- ============================================================= -->
<!--                    PUBLIC DOCUMENT TYPE DEFINITION            -->
<!--                        TYPICAL INVOCATION                     -->
<!--
"-//NLM//DTD JATS (Z39.96) Article Authoring DTD Over-ride Content and Attribute Module v3.0 20080202//EN"
Delivered as file "JATS-articleauthcustom-models1.ent"             -->
<!-- ============================================================= -->


<!-- ============================================================= -->
<!-- SYSTEM:     Article Authoring DTD of the JATS DTD Suite       -->         
<!--                                                               -->
<!-- PURPOSE:    To declare the Parameter Entities (PEs) used to   -->
<!--             over-ride the content models, parts of content    -->
<!--             models, or attribute lists of the JATS DTD Suite  -->
<!--                                                               -->
<!--             Or-groups within models should use mixes or       -->
<!--             classes rather than name elements directly.       -->
<!--                                                               -->
<!--             Note: Since PEs must be declared before they      -->
<!--             are used, this module must be called before the   -->
<!--             content modules that declare elements.            -->
<!--                                                               -->
<!-- TAG SET SPONSOR                                               -->
<!--             National Center for Biotechnology                 -->
<!--                Information (NCBI)                             -->
<!--             National Library of Medicine (NLM)                -->
<!--                                                               -->
<!-- CREATED FOR:                                                  -->
<!--             This DTD was created from the JATS DTD Suite.     -->
<!--             Authors, digital archives, and publishers may     -->
<!--             use the DTD as is for markup of journal           -->
<!--             literature or related material for archiving      -->
<!--             and transferring such material between archives   -->
<!--             or create a custom XML DTD from the Suite for     -->
<!--             these purposes.                                   -->
<!--                                                               -->
<!--             This DTD is in the public domain. An organization -->
<!--             that wishes to create its own DTD from the suite  -->
<!--             may do so without permission from NLM.            -->
<!--                                                               -->
<!--             The suite has been set up to be extended using a  -->
<!--             new DTD file and a new DTD-specific customization -->
<!--             module to redefine the many Parameter Entities.   -->
<!--             Do not modify the suite directly or redistribute  -->
<!--             modified versions of the suite.                   -->
<!--                                                               -->
<!--             In the interest of maintaining consistency and    -->
<!--             clarity for potential users, NLM requests:        -->
<!--                                                               -->
<!--             1. If you create a DTD from the JATS DTD Suite    -->
<!--                and intend to stay compatible with the suite,  -->
<!--                then please include the following statement    -->
<!--                as a comment in all of your DTD modules:       -->
<!--                   "Created from, and fully compatible with,   -->
<!--                    the ANSI/NISO Z39.96 Journal Article Tag   -->
<!--                    Suite (JATS)."                             -->
<!--                                                               -->
<!--             2. If you alter one or more modules of the suite, -->
<!--                then please rename your version and all its    -->
<!--                modules to avoid any confusion with the        -->
<!--                original suite. Also, please include the       -->
<!--                following statement as a comment in all your   -->
<!--                DTD modules:                                   -->
<!--                   "Based in part on, but not fully compatible -->
<!--                    with, the ANSI/NISO Z39.96 Journal Article -->
<!--                    Tag Suite (JATS)."                         -->
<!--                                                               -->
<!-- ORIGINAL CREATION DATE:                                       -->
<!--             June 2005                                         -->
<!--                                                               -->
<!-- CREATED BY: Mulberry Technologies, Inc. for the NISO Z39.96   -->
<!--             Working Group. Mulberry Technologies was          -->
<!--             supported by National Center for Biotechnology    -->
<!--             Information (NCBI), a center of the US National   -->
<!--             Library of Medicine (NLM).                        -->
<!--                                                               -->
<!--             The Article Authoring DTD is built from the       -->
<!--             Archiving and Interchange DTD Suite.              -->
<!--                                                               -->
<!--             Suggestions for refinements and enhancements to   -->
<!--             this DTD should be sent in email to:              -->
<!--                 jats@ncbi.nlm.nih.gov                         -->
<!-- ============================================================= -->


<!-- ============================================================= -->
<!--                    DTD VERSION/CHANGE HISTORY                 -->
<!-- ============================================================= -->
<!--

Version  Reason/Occasion                   (who) vx.x (yyyy-mm-dd)
    =============================================================
     JATS Version 1.2d1              (DAL/BTU) v1.2d1  (2017-06-31)

     NISO JATS is a continuing maintenance NISO Standard, which
     requires voting by the ANSI and NISO memberships to be changed. 
      
     This draft DTD represents an interim version of the
     non-normative JATS DTD Suite, as an indication to JATS users
     the decisions that have been made by the JATS Standing
     Committee. This draft has not yet been given public review 
     or voting. The formal public identifiers were changed in the 
     modules and the catalogs.

 42. SOURCE - Deleted the override for source elements, since Blue, 
     Pumpkin, and the default all have the same model.

 41. PERSON GROUP TYPES  - Replaced the person-group-types parameter
     entity ("allauthors | assignee | author | compiler | curator | 
     director | editor | guest-editor | illustrator | inventor |
     research-assistant | translator | transed") with CDATA to allow
     all types.
 
 40. SOURCE - Added the following elements to <source>, to more
     closely mirror the model of <article-title>:
        - inline-display.class
             alternatives | inline-graphic | private-char
        - inline-math.class 
             chem-struct | inline-formula
        - math.class
             mml:math
        - phrase-content.class
             named-content | styled-content

 39. ARTICLE META MODEL
     - Added new optional element <article-version>
       inside <article-meta> to hold one version number for the 
       article.

 38. PERSON-GROUP
     -  Made @person-group-type values into a parameter
        entity and added values “illustrator” and “research-assistant”.
      - Removed string-name.class PE from PE person-group-elements
        because <string-name> was added to name.class, which
        person-group-elements already used.

 37. FOOTNOTES
      - Made @fn-type into a CDATA from a restricted list.
        Deleted fn-types PE, which used to be used.

 36. JATS became version "1.2d1" and "v1.1d2 20170631" 

    =============================================================
     JATS Version 1.1                (DAL/BTU) v1.1  (2015-12-15)

     JATS is a continuing maintenance NISO Standard, which
     requires voting by the ANSI and NISO memberships to be changed. 
     JATS 1.1 was approved in late 2015, so the formal public 
     identifiers were changed in the modules and the catalogs.
     No model or attribute changes were made at this time. 
 
 35. JATS became version "1.1" and "v1.1 20151215"

     =============================================================
     JATS Version 1.1d3             (DAL/BTU) v1.1d3  (2015-03-01)
   
     The changes in this release are in response to NISO 
     License and Indicators Recommended Practice.

     NISO JATS is a continuing maintenance NISO Standard, which 
     requires voting by the NISO membership to be changed. This
     Committee Draft 1.1d3 will be sent to the NISO voting
     membership, to become (if approved) NISO JATS 1.1.
     
     This draft DTD represents an interim version of the
     non-normative JATS DTD Suite, as an indication to JATS users
     the decisions that have been made by the JATS Standing
     Committee.

 34. JATS became version "1.1d3" and "v1.1 20150301//EN"
 
     =============================================================
     JATS Version 1.1d2              (DAL/BTU) v1.1d2 (2014-09-30)
   
     NISO JATS is a continuing maintenance NISO Standard, which 
     requires voting by the NISO membership to be changed. This
     Committee Draft 1.1d2 will be sent to the NISO voting
     membership, to become (if approved) NISO JATS 1.1.
     
     This catalog represents an interim version of the
     non-normative JATS DTD Suite, as an indication to JATS users
     the decisions that have been made by the JATS Standing
     Committee.
 
 33. COLLAB ATTRIBUTES - Redefined to get rid of @symbol
 
 32. UNUSED PARAMETER ENTITIES DELETED
        - aff-model
        - fig-group-model
 
 31. VERSION ELEMENTS EDITION
     The new element <version> uses the PE %-just-rendition,
     but Authoring has set that PE to null, so the <version>
     element added <sup> and <sub> to be like the content
     of <edition>.
 
 30. VALUE LIST FOR PERSON-GROUP-TYPE
     Added "curator" to the list of person-group role values.

 29. NAME OF JATS COMMON ATTRIBUTES
     Common attlists renamed with "jats-" at the front.

 28. TITLE FOR LIST ITEMS
     Added an optional <title> to the beginning of each <list-item>.

 27. EDITION ELEMENTS - Added <sub> and <sup> to the model of
     edition. These were needed now that the "Edition" element
     has been renamed and repurposed as "Edition Statement".

 26. STATEMENT - Added new statement.class inside the model
     for <statement>, so that statements can be recursive.

 25. JATS became version "1.1d2" and "v1.1d2 20140930//EN"

 24. REFERENCE TYPES
      - Added "collab"

 23. CONFERENCE LOCATION ELEMENTS and PUBLISHER-LOC ELEMENTS
      - Added 3 new OPTIONAL elements: <city>, <state>, 
        and <postal-code>

 22. ADDRESS MODEL
      - Added 3 new OPTIONAL elements: <city>, <state>, 
        and <postal-code>
   
     =============================================================
     NISO JATS Version 1.1d1           (DAL/BTU) v1.1 (2013-11-15)
   
     ANSI/NISO Z39.96-2012 (pre-release for V1.0 BITS; Version 1.1d1) 

     NISO JATS Standing Committee met and answered the requests and
     suggestions from the NISO request forms.

     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
     XSDs, RNGs and supporting documentation are available at
           http://jats.nlm.nih.gov/1.0/

 21.GLOBAL ATTRIBUTES - Added the new parameter entity 
        "%jats-common-atts;
     to every element in this module. This PE adds (for now) the
     @id attribute and the @xml:base attribute to every element,
     whether metadata or narrative.
     Since the @id in this parameter entity is optional, a second
     parameter entity jats-common-atts-id-required was also added.
     The two are kept in sync with the jats-base-atts parameter 
     entity.

 20. ON-BEHALF-OF NEW CONTENT
     Added <xref>, <fn>, and <target> (the simple links) to 
     <on-behalf-of>.

 19. NEW TOGGLE ATTRIBUTE
     @toggle added to the attributes for <underline> through
     %underline-atts;.

 18. NEW ELEMENT <era>
     Added to the model of <date>, optional following year.

 17. XML Base
     Added the attribute @xml:base to the Global (common)
     attributes used on all elements.

 16. INSTITUTION WRAP ADDED
     Added the elements <institution-wrap> to the following elements
     through the institution-wrap.class:
      - <address>
      - <conf-sponsor>
      - <funding-source>
      - <publisher-name>
      - <std-organization>

 15. ABSTRACTS AND KEYWORDS 
     The 2 new classes described in #14 were used to add 
     <abstract> and <keyword> to many elements in the Archiving
     and Publishing models. Since these were NOT to be added to
     Authoring, some elements that did not need to be
     redefined before, now need to be redefined. No content
     model changes were made by these redefinitions.
     - disp-formula-group
     - statement
    
 14. ABSTRACTS AND KEYWORDS
       Changed "abstract*" to "(%abstract.class;)*"
       and "kwd-group*" to "(%kwd-group.class;)*" since those
       classes now exist. Elements should have a limited number of
       ways to be invoked.
        - article-meta (through %article-meta-model;)
   
     =============================================================
     NISO JATS Version 1.0             (DAL/BTU) v1.0 (2012-xx-xx)
   
     ANSI/NISO Z39.96-2012 (Version 1.0) 

     Details concerning ANSI/NISO Z39.96-2012 JATS-based DTDs,  
     XSDs, RNGs and supporting documentation are available at
           http://jats.nlm.nih.gov/1.0/
   
 13. RELATED OBJECT - Added <related-object> everywhere
     <related-article> was used, including inside 
     <article-meta> using article-meta-model.

 12. CONTRIBUTOR MODEL - Added "contrib-id.class" to the beginning
     at the <contrib> model, to hold identifiers for people,
     such as publishers-specific IDs, ORCIDs, and JST and NII 
     identifiers.
   
 11. STANDARDS ORGANIZATION - Added std-organization-elements
     to reduce what was allowed in the names of standards bodies.
   
 10. PARAGRAPH PARAMETER ENTITY SYNTAX CHANGE (no models changed)
     Fixed content models that were stated as "p*", "p+", and
     "sec*" to use the %just-para.class; and %sec.class; classes. 
     Element models that were changed include:
      - abstract
      - ack
      - app-group
      - disp-quote-model
      - glossary
      - ref-list
   
  9. Updated the public identifier to "v1.0 20120330//EN", 
     modified the formal public identifier to include "JATS (Z39.96)",
     and the filename as delivered to include "JATS" and the
     new version number "1".

     =============================================================
     Version 0.4                       (DAL/BTU) v0.4 (2011-01-31)
   
     This Tag Set is in the process of becoming a NISO standard.
     The version numbers are starting over from 0.4", as a Trial
     Use Draft, to be made into "Version 1.0" when the Tag Suite 
     becomes a NISO standard. Thus, the version number that would
     have been "NLM Version 3.1 Draft" has become NISO JATS
     "Version 0.4".

     Details on NISO Trial Use Draft Version 0.4 are available at
           http://jats.nlm.nih.gov/JATS-0.4.
   
  8. Updated the DTD-version attribute to "0.4" 
   
  7. Updated the public identifier to "v0.4 20110131", 
     modified the formal public identifier to include "JATS (Z39.96)",
     and the filename as delivered to include "JATS" and the
     new version number "0".
           http://jats.nlm.nih.gov/0.4.

  6. KEYWORD GROUP - Made <kwd-group> repeatable inside
     <article-meta> by modifying %article-meta-model;

  5. MEDIA - In 3.0 <graphic> and <media> used the same model,
     defined by %graphic-model;. In 0.4, %media-model; was added to
     separate the redefinition possibilities. Since Authoring had
     redefined %graphic-model;, the same redefinition was necessary
     for <media> through %media-model;.

  4. INITIALS - Removed the attribute over-ride for <surname> and
     <given-names> to allow the use of @initials.

  3. PERSON-GROUP - Became a mixed-content model, so the parameter
     entity %person-group-model: was changed to
     %person-group-elements;, which will be mixed with #PCDATA
     as defined in references.ent. The PE person-group-model has
     been retained in references.ent for compatibility, but has been
     set to the mixed model using person-group-elements.

  2. @SPECIFIC-USE and @XML:LANG - Added the @specific-use
     to the following over-rides:
      - fn through fn-atts (@specific-use only; @xml:lang already)
      - inline-graphic-atts through inline-graphic-atts (both)
      - list through list-atts (@xml:lang only; @specific-use already)
      - person-group through person-group-atts (both
      - underline through underline-atts (both)

     =============================================================
     Version 3.0                       (DAL/BTU) v3.0 (2007-10-31)

     Version 3.0 is the first non-backward-compatible release.
     In addition to the usual incremental changes, some
     elements and attributes have been renamed and/or remodeled
     to better meet user needs and to increase tag set consistency.
     All module change histories are available through the Tag Suite
     web site at http://dtd.nlm.nih.gov.

     Details on version 3.0 are available at
           http://dtd.nlm.nih.gov/3.0.

  1. Updated public identifier to "v3.0 20080202//EN"              -->

<!-- ============================================================= -->
<!-- Details concerning 
     ANSI/NISO Z39.96-2015 JATS-based DTDs, XSDs, 
     RNGs and supporting documentation are available at
           http://jats.nlm.nih.gov/1.1/                            -->

 
<!-- ============================================================= -->
<!--                    INLINE MIXES TO OVER-RIDE CONTENT MODELS   -->
<!--                    (ELEMENTS TO BE ADDED TO #PCDATA IN MODELS)-->
<!-- ============================================================= -->


<!--                    ADDRESS LINE ELEMENTS                      -->
<!--                    Elements for use in the <addr-line> element-->
<!ENTITY % addr-line-elements
                        "%rendition-plus; | %address-line.class;"    >


<!--                    AFFILIATION ELEMENTS                       -->
<!--                    Elements for use in the <aff> element
                        Removed <label>                            -->
<!ENTITY % aff-elements "| %address.class; | %address-link.class; |
                           %break.class; |  %emphasis.class; |
                           %simple-link.class; | %subsup.class;"     >


<!--                    AWARD-ID ELEMENTS                          -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the <award-id>                             -->
<!ENTITY % award-id-elements
                        ""                                           >


<!--                    CHEMICAL STRUCTURE ELEMENTS                -->
<!--                    Those elements that may mix with the data
                        characters inside a Chemical Structure
                        <chem-struct>                              -->
<!ENTITY % chem-struct-elements
                        "| %access.class; | %address-link.class; |
                         %break.class; |  %emphasis.class;  |
                         %id.class; | %list.class; |
                         %simple-display.class; |
                         %simple-link.class; | %subsup.class; "      >


<!--                    CITATION ELEMENTS                          -->
<!--                    Content for both types of citation. These
                        elements may be mixed with #PCDATA in the
                        <mixed-citation> element (in which all
                        punctuation and spacing are left intact), and
                        they also constitute the choices that can be
                        used to form the all-element-content of the
                        <element-citation> element (in which
                        punctuation and spacing are removed).
                        Design Note: All inline mixes begin with an
                        OR bar.                                    -->
<!ENTITY % citation-elements
                        "%emphasis.class; | %inline-display.class; |
                         %inline-math.class; |
                         %phrase.class; | %references.class; |
                         %subsup.class;"                             >


<!--                    COLLABORATIVE (GROUP) AUTHOR ELEMENTS      -->
<!--                    Elements for use in the <collab> element
                        Design Note: All inline mixes begin with an
                        OR bar, but since %rendition-plus; is an
                        inline mix, the OR bar is already there.   -->
<!ENTITY % collab-elements
                        "%rendition-plus; | %address.class; |
                         %contrib-info.class;"                       >


<!--                    COMMENT ELEMENTS                           -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the Comment in a Citation <comment> element.
                        Design Note: All inline mixes begin with an
                        OR bar, but since %simple-phrase; is an
                        inline mix, the OR bar is already there.   -->
<!ENTITY % comment-elements
                        "| %address-link.class; |
                         %article-link.class; | %emphasis.class; |
                         %inline-display.class; |
                         %inline-math.class; |
                         %phrase.class; |
                         %subsup.class;"                             >


<!--                    CONFERENCE ACRONYM ELEMENTS                -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the conference acronym.
                        Design Note: All inline mixes begin with an
                        OR bar, but since %simple-text; is an online
                        mix, the OR bar is already there.          -->
<!ENTITY % conf-acronym-elements
                        ""                                           >


<!--                    CONFERENCE LOCATION ELEMENTS               -->
<!--                    Elements for use in the <conf-loc> element
                        Removed %simple-text;                      -->
<!ENTITY % conf-loc-elements
                        "| %address.class;"                          >


<!--                    CONFERENCE NAME ELEMENTS                   -->
<!--                    Elements for use in the <conf-name> element.
                        Removed %simple-text;                      -->
<!ENTITY % conf-name-elements
                        ""                                           >


<!--                    CONFERENCE NUMBER ELEMENTS                 -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the conference number.
                        Design Note: All inline mixes begin with an
                        OR bar, but since %simple-text; is an inline
                        mix, the OR bar is already there.          -->
<!ENTITY % conf-num-elements
                        ""                                           >


<!--                    CONFERENCE SPONSOR  ELEMENTS               -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the conference sponsor.                    -->
<!ENTITY % conf-sponsor-elements
                        "| %institution-wrap.class;"                 >


<!--                    CORRESPONDENCE INFORMATION ELEMENTS        -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the correspondence information.            -->
<!ENTITY % corresp-elements
                        "| %address.class; | %address-link.class; |
                         %emphasis.class; | %subsup.class;"          >


<!--                    DEGREE(S) ELEMENTS                         -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        <degrees>                                  -->
<!ENTITY % degrees-elements
                        ""                                           >


<!--                    FORMULA, DISPLAY ELEMENTS                  -->
<!--                    Elements for use mixed with #PCDATA within
                        the <disp-formula> element                 -->
<!ENTITY % disp-formula-elements
                         "| %access.class; | %address-link.class; |
                          %break.class; | %emphasis.class; |
                          %display-back-matter.class; |
                          %inline-display.class; |
                          %inline-math.class; | %label.class; |
                          %math.class; | %simple-display.class; |
                          %subsup.class;"                            >


<!--                    EDITION ELEMENTS                           -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        <edition>                                  -->
<!ENTITY % edition-elements
                        "| %subsup.class;"                           >


<!--                    FAX NUMBER ELEMENTS                        -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <fax>                                    -->
<!ENTITY % fax-elements ""                                           >


<!--                    FUNDING-SOURCE ELEMENTS                    -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the <funding-source>                       -->
<!ENTITY % funding-source-elements
                        "| %institution-wrap.class;"                 >


<!--                    GIVEN (FIRST) NAMES ELEMENTS               -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <given-names>                            -->
<!ENTITY % given-names-elements
                        ""                                           >


<!--                    INSTITUTION NAME ELEMENTS                  -->
<!--                    Elements for use in the <institution>
                        element                                    -->
<!ENTITY % institution-elements
                        "| %subsup.class;"                           >


<!--                    ISSUE TITLE ELEMENTS                       -->
<!--                    Elements for use with data characters inside
                        the model for the <issue> element          -->
<!ENTITY % issue-elements
                        ""                                           >


<!--                    KEYWORD CONTENT ELEMENTS                   -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a keyword <kwd>.                           -->
<!ENTITY % kwd-elements "| %emphasis.class; | %phrase.class; |
                         %subsup.class;"                             >


<!--                    LABEL ELEMENTS                             -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the <label> element                        -->
<!ENTITY % label-elements
                        ""                                           >


<!--                    PATENT NUMBER ELEMENTS                     -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        <patent>                                   -->
<!ENTITY % patent-elements
                        ""                                           >


<!--                    PERSON GROUP MODEL                         -->
<!--                    Content model for the <person-group> element
                                                                   -->
<!ENTITY % person-group-elements
                        "| %name.class; | %person-group-info.class;" >


<!--                    PHONE NUMBER ELEMENTS                      -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <phone number>                           -->
<!ENTITY % phone-elements
                        ""                                           >


<!--                    PREFIX ELEMENTS                            -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <prefix>                                 -->
<!ENTITY % prefix-elements
                        ""                                           >


<!--                    PREFORMATTED TEXT ELEMENTS                 -->
<!--                    Elements that may be used, along with data
                        characters, inside the content model for the
                        <preformat> element, in which whitespace,
                        such as tabs, line feeds, and spaces will
                        be preserved                               -->
<!ENTITY % preformat-elements
                        "| %access.class; | %address-link.class; |
                         %display-back-matter.class; |
                         %emphasis.class; | %phrase.class; |
                         %subsup.class;"                             >


<!--                    PRODUCT ELEMENTS                           -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        the <product> element                      -->
<!ENTITY % product-elements
                        "| %article-link.class; | %emphasis.class; |
                         %inline-display.class; |
                         %inline-math.class; | %phrase.class; |
                         %price.class; |
                         %references.class; | %simple-link.class; |
                         %subsup.class;"                             >


<!--                    PUBLISHER'S LOCATION ELEMENTS              -->
<!--                    Elements for use in the Publisher Location
                        <publisher-loc> element                    -->
<!ENTITY % publisher-loc-elements
                        "| %address.class;"                          >


<!--                    PUBLISHER'S NAME ELEMENTS                  -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <publisher-name>                         -->
<!ENTITY % publisher-name-elements
                        "| %institution-wrap.class;"                 >


<!--                    ROLE ELEMENTS                              -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <role>
                        Design Note: All inline mixes begin with an
                        OR bar; since %rendition-plus; is an
                        inline mix, the OR bar is already there.   -->
<!ENTITY % role-elements
                        ""                                           >


<!--                    SUFFIX ELEMENTS                            -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <suffix>                                 -->
<!ENTITY % suffix-elements
                        ""                                           >


<!--                    STANDARDS ORGANIZATION ELEMENTS            -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        <std-organization>.
                        Removed emphasis.class.                    -->
<!ENTITY % std-organization-elements
                        "| %institution-wrap.class; | %subsup.class;">


<!--                    SURNAME ELEMENTS                           -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <surname>                                -->
<!ENTITY % surname-elements
                        ""                                           >


<!--                    DEFINITION LIST: TERM ELEMENTS             -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <term>.
                        Design Note: All inline mixes begin with an
                        OR bar, but since %simple-phrase; is an
                        inline mix, the OR bar is already there.   -->
<!ENTITY % term-elements
                        "| %address-link.class; |
                         %article-link.class; | %emphasis.class; |
                         %inline-display.class; |
                         %inline-math.class; | %phrase.class; |
                         %simple-link.class; | %subsup.class;"       >


<!--                    URI ELEMENTS                               -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <uri>                                    -->
<!ENTITY % uri-elements
                        ""                                           >


<!--                    VERSION ELEMENTS                           -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        <version>                                  -->
<!ENTITY % version-elements
                        "| %subsup.class;"                           >



<!--                    VOLUME NUMBER ELEMENTS                     -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        a <volume>                                 -->
<!ENTITY % volume-elements
                        ""                                           >


<!-- ============================================================= -->
<!--                    OVER-RIDES USED IN SHARED CONTENT MODELS   -->
<!-- ============================================================= -->


<!--                    DISPLAY ELEMENT BACK MATTER SEQUENCE       -->
<!--                    Miscellaneous stuff at the end of a display
                        element such as a figure or a boxed text
                        element such as a sidebar                  -->
<!ENTITY % display-back-matter
                        "attrib?, permissions?"                      >


<!-- ============================================================= -->
<!--                    OVER-RIDES OF SHARED CONTENT MODELS (FULL) -->
<!-- ============================================================= -->


<!--                    CONTENT MODEL FOR A STRUCTURAL SECTION     -->
<!--                    The model for a section that requires that a
                        section title be present, used for elements
                        such as Section and Appendix.              -->
<!ENTITY % sec-model    "(title, (%para-level;)*, (%sec-level;)* )"  >


<!--                    CONTENT MODEL FOR AN UNTITLED SECTION      -->
<!--                    The model for a section-like structure that
                        may or may not have an initial title       -->
<!ENTITY % sec-opt-title-model
                        "(title?, (%para-level;)*, (%sec-level;)* )" >


<!-- ============================================================= -->
<!--                    OVER-RIDES OF CONTENT MODELS (FULL MODELS) -->
<!-- ============================================================= -->


<!--                    ABSTRACT MODEL                             -->
<!--                    Abstracts may contain one or more paragraphs
                        (as a typical abstract does) or titled
                        sections, as is done in many physics
                        articles.                                  -->
<!ENTITY % abstract-model
                        "(title?, (%just-para.class;)*, %sec.class;*)"
                                                                     >


<!--                    ACKNOWLEDGMENTS MODEL                      -->
<!--                    Content model for the <ack> element
                        Deleted optional sections and closing
                        reference list                             -->
<!ENTITY % ack-model    "(title?, (%just-para.class;)*)"             >


<!--                    ANONYMOUS MODEL                            -->
<!--                    Content model for the element <anonymous>.
                        When present, it is used to generate the text
                        "anonymous" or "anon.", etc.               -->
<!ENTITY % anonymous-model
                        "EMPTY"                                      >


<!--                    ADDRESS MODEL                              -->
<!--                    Content model for the <address> element    -->
<!ENTITY % address-model
                        "((%institution-wrap.class;)*, addr-line*,
                          city?, state?, postal-code?,
                          country, phone*, fax*, email*, ext-link*, 
                          uri*)"                                     >


<!--                    APPENDIX GROUP MODEL                       -->
<!--                    Content model for the <app-group> element  -->
<!ENTITY % app-group-model
                        "(title?, (%just-para.class;)*, 
                          (%app.class;)* )"                          >


<!--                    ARTICLE METADATA MODEL                     -->
<!--                    Full content model for the metadata that is
                        specific to the article.                   -->
<!ENTITY % article-meta-model
                        "(article-version?, title-group, 
                          contrib-group,
                          (product | supplementary-material)*,
                          permissions?, self-uri*, 
                          (%related-article.class;)*, 
                          (%abstract.class;)+, (%kwd-group.class;)*,
                          funding-group*,
                          conference*)"                              >


<!--                    BOXED TEXT MODEL                           -->
<!--                    Complete content model for the boxed text
                        element which is used for sidebars,
                        marginalia, and other text that is outside
                        the narrative flow.                        -->
<!ENTITY % boxed-text-model
                        "((%id.class;)*, caption?, (%para-level;)*,
                          (%sec-level;)*, %display-back-matter; )"   >


<!--                    CHEMICAL STRUCTURE WRAPPER MODEL           -->
<!--                    Content model for the Chemical Structure
                        Wrapper <chem-struct-wrap> element         -->
<!ENTITY % chem-struct-wrap-model
                        "((%id.class;)*, (%caption.class;)?,
                          (%access.class;)*,
                          (%inside-chem-struct-wrap.class;)+,
                          %display-back-matter;)"                    >


<!--                    CONFERENCE MODEL                           -->
<!--                    The element components that describe
                        of a conference                            -->
<!ENTITY % conference-model
                        "(conf-date, (conf-name | conf-acronym )+,
                          conf-num?, conf-loc?, conf-sponsor*,
                          conf-theme?)"                              >


<!--                    CONTRIBUTOR MODEL                          -->
<!--                    Content model for the <contrib> element    -->
<!ENTITY % contrib-model
                        "((%contrib-id.class;)*, (%name.class;)*, 
                          (%degree.class;)*, role*, on-behalf-of?,
                          (%aff-alternatives.class;)*, address*,
                          email*, ext-link*, uri*, bio?,
                          author-comment?)"                          >


<!--                    CONTRIBUTOR GROUP MODEL                    -->
<!--                    Content model for the <contrib-group>
                        element                                    -->
<!ENTITY % contrib-group-model
                        "(%contrib.class;+)"                         >


<!--                    DATE ELEMENTS MODEL                        -->
<!--                    The content models for elements that describe
                        dates, such as Publication Date <pub-date> and
                        History Dates <date>.  The <string-date>
                        element holds dates for which months and
                        years are not given, for example "first
                        quarter", "spring", etc.                   -->
<!ENTITY % date-model
                        "(((day?, month?) | season)?, year, era?)"   >


<!--                    DEFINITION LIST MODEL                      -->
<!--                    Content model for the <def-list> element   -->
<!ENTITY % def-list-model
                        "(title?, term-head?, def-head?, 
                          (%def-item.class;)+)"                      >


<!--                    DEFINITION LIST: DEFINITION ITEM ELEMENTS  -->
<!--                    The elements that can be included inside
                        the content model of a <def-item>          -->
<!ENTITY % def-item-model
                        "(term, def*)"                               >


<!--                    FORMULA, DISPLAY GROUP MODEL               -->
<!--                    Content model for an <disp-formula-group>  -->
<!ENTITY % disp-formula-group-model
                        "(label?, (%caption.class;)?,
                          (%access.class; | %address-link.class;)*,
                          (%block-math.class;)* )"                   >


<!--                    QUOTE, DISPLAYED MODEL                     -->
<!--                    Content model for the Display Quote element-->
<!ENTITY % disp-quote-model
                        "(title?, (%just-para.class;)+, 
                          %display-back-matter; )"                   >


<!--                    FIGURE-LIKE CONTENT MODEL                  -->
<!--                    Content model for the Figure element and any
                        similarly structured elements              -->
<!ENTITY % fig-model    "((%id.class;)*, (%caption.class;)?,
                          (%access.class;)*,
                          (%block-math.class; |
                           %chem-struct-wrap.class; |
                           %intable-para.class; |
                           %just-table.class; | %just-para.class; |
                           %list.class; | %simple-display.class;)*,
                          %display-back-matter; )"                   >


<!--                    FOOTNOTE GROUP MODEL                       -->
<!--                    Content model for the <fn-group> element   -->
<!ENTITY % fn-group-model
                        "(title?, (%fn-link.class;)+ )"              >


<!--                    FOOTNOTE MODEL                             -->
<!--                    Content model for Footnote <fn>            -->
<!ENTITY % fn-model     "((%just-para.class;)+ )"                    >


<!--                    GLOSSARY MODEL                             -->
<!--                    Content model for the <glossary> element   -->
<!ENTITY % glossary-model
                        "(title?, (%just-para.class;)*, def-list*, 
                          glossary* )"        >


<!--                    GRAPHIC MODEL                              -->
<!--                    Content model for the <graphic> element    -->
<!ENTITY % graphic-model
                        "((%id.class;)?, (%access.class;)*,
                          (%display-back-matter;)*) "                >


<!--                    KEYWORD GROUP MODEL                        -->
<!--                    Content model for a <kwd-group> element    -->
<!ENTITY % kwd-group-model
                        "(title?, (%kwd.class;)+ )"                  >


<!--                    LIST ITEM ELEMENTS                         -->
<!--                    The elements that can be included inside
                        the content model of a <list-item>         -->
<!ENTITY % list-item-model
                        "(label?, title?, 
                          (%just-para.class; | %list.class;)+ )"     >


<!--                    LIST MODEL                                 -->
<!--                    Content model for the <list> element       -->
<!ENTITY % list-model   "(title?, (%list-item.class;)+)"             >


<!--                    MEDIA MODEL                                -->
<!--                    Content model for the <media> element      -->
<!ENTITY % media-model  "((%id.class;)?, (%access.class;)*,
                          (%display-back-matter;)*) "                >


<!--                    ON BEHALF OF CONTENT ELEMENTS              -->
<!--                    The elements that can be included along with
                        data characters inside the content model of
                        <on-behalf-of>
                        Design Note: -%rendition-plus; begins with
                        an OR bar, so this inline mix beguines with
                        an OR bar.                                 -->
<!ENTITY % on-behalf-of-elements
                        "%rendition-plus; | %institution-wrap.class; |
                         %simple-link.class;"                        >



<!--                    REFERENCE LIST MODEL                       -->
<!--                    Content model for the <ref-list> element   -->
<!ENTITY % ref-list-model
                        "(title?, (%just-para.class;)*, ref+)"       >


<!--                    REFERENCE ITEM MODEL
                        Model for the <ref> element                -->
<!ENTITY % ref-model    "(%citation.class;)+"                        >


<!--                    STATEMENT, FORMAL MODEL                    -->
<!--                    Content model for the <statement> element  -->
<!ENTITY % statement-model
                        "(label?, title?, 
                          (%just-para.class; | %statement.class;)+,
                          (%display-back-matter.class;)*)"           >


<!--                    SUPPLEMENTARY MATERIAL MODEL               -->
<!--                    Content model for the
                        <supplementary-material> element           -->
<!ENTITY % supplementary-material-model
                        "((%id.class;)*, (%caption.class;)?,
                          (%access.class; | %address-link.class;)*,
                          (%just-para.class;)*,
                          %display-back-matter; )"                   >


<!--                    TABLE WRAPPER CONTENT MODEL                -->
<!--                    Content model for the container element that
                        surrounds the standard table models for row
                        and columns.                               -->
<!ENTITY % table-wrap-model
                        "((%id.class;)*, (%caption.class;)?,
                          (%access.class;)*,
                          (%inside-table-wrap;)*,
                          %table-foot.class;?,
                          %display-back-matter; )"                   >


<!--                    TITLE GROUP MODEL                          -->
<!--                    Content model for the <title-group> element-->
<!ENTITY % title-group-model
                        "(article-title, subtitle?)"                 >


<!--                    TRANSLATED ABSTRACT MODEL                  -->
<!--                    Content model for an <trans-abstract> element.
                                                                   -->
<!ENTITY % trans-abstract-model
                        "(title?, (%just-para.class;)*, %sec.class;*)"
                                                                     >


<!--                    VERSE GROUP MODEL                          -->
<!--                    Content model for the <verse-group> element-->
<!ENTITY % verse-group-model
                        "(title?, subtitle?, verse-line+,
                          %display-back-matter; ) "                  >


<!-- ============================================================= -->
<!--                    OVER-RIDES OF ATTRIBUTE VALUES             -->
<!-- ============================================================= -->


<!--                    LIST PREFIX TYPES                          -->
<!--                    Used to request a specific style of prefix
                        characters for the items in lists and
                        de-lists. Ordered is number or letters,
                        bulleted is bullets or other non-ordered
                        character, simple has no prefix at all.    -->
<!ENTITY % list-types   "bullet | order | simple"                    >

<!-- ============================================================= -->
<!--                    DUPLICATE ATTRIBUTE DECLARATIONS           -->
<!--                    (These are unchanged from the base Suite,  -->
<!--                    but are used in attribute over-rides below)-->
<!-- ============================================================= -->


<!--                    COMMON ATTRIBUTES                          -->
<!--                    These lists of attributes will be added to 
                        nearly every element, in both the document 
                        metadata and the document body, of the entire 
                        Tag Set:
                          - including table elements for both the 
                              XHTML-inspired and OASIS-inspired
                              table model elements
                          - excluding only <mml:math> and 
                              <xi:include> (whose namespaces JATS
                              does not control).
                           Great care should be taken to use these
                        attributes judiciously, not as a shortcut to
                        thinking through where an attribute should be
                        used. Potential use cases include adding
                        @xml:lang or some RDFa attribute to every 
                        elements.                                  -->


<!--                    BASE ATTRIBUTES                            -->
<!--                    Holds all the common attributes except @id.
                        Used to keep the two common attribute lists 
                        in sync. To add a global attribute, modify
                        this list.                                 -->
<!ENTITY % jats-base-atts
            "xml:base   CDATA                             #IMPLIED"  >


<!--                    COMMON ATTRIBUTES                          -->
<!--                    Holds all the common attributes, as defined in
                        the base attribute parameter entity, plus an
                        optional @id.                              -->
<!ENTITY % jats-common-atts
            "id         ID                                #IMPLIED 
             %jats-base-atts;"                                       >


<!--                    COMMON ATTRIBUTES                          -->
<!--                    Holds all the common attributes, as defined in
                        the base attribute parameter entity, plus a 
                        required @id.                              -->
<!ENTITY % jats-common-atts-id-required
            "id         ID                                #REQUIRED
             %jats-base-atts;"                                       >


<!--                    XLINK LINK ATTRIBUTES                      -->
<!--                    Attributes for any element that must be a
                        link                                       -->
<!ENTITY % link-atts
            "xmlns:xlink CDATA                            #IMPLIED
             xlink:type  (simple)                         #IMPLIED
             xlink:href  CDATA                            #REQUIRED
             xlink:role  CDATA                            #IMPLIED
             xlink:title CDATA                            #IMPLIED
             xlink:show  (embed | new | none | other | replace)
                                                          #IMPLIED
             xlink:actuate
                         (none | onLoad | onRequest | other)
                                                          #IMPLIED"  >


<!--                    MIGHT LINK XLINK ATTRIBUTES                -->
<!--                    Attributes for any element that may be a link
                        but need not be one                        -->
<!ENTITY % might-link-atts
            "xmlns:xlink CDATA                            #IMPLIED
             xlink:type  (simple)                         #IMPLIED
             xlink:href  CDATA                            #IMPLIED
             xlink:role  CDATA                            #IMPLIED
             xlink:title CDATA                            #IMPLIED
             xlink:show  (embed | new | none | other | replace)
                                                          #IMPLIED
             xlink:actuate
                         (none | onLoad | onRequest | other)
                                                          #IMPLIED"  >


<!-- ============================================================= -->
<!--                    OVER-RIDES OF ATTRIBUTE LISTS              -->
<!-- ============================================================= -->


<!--                    COLLABORATION ATTRIBUTES                   -->
<!--                    Attributes for <collab>                    -->
<!ENTITY % collab-atts
            "%jats-common-atts;                                        
             collab-type
                        CDATA                             #IMPLIED
             specific-use
                        CDATA                             #IMPLIED
             xml:lang   NMTOKEN                           #IMPLIED
             %might-link-atts;"                                      >


<!--                    FOOTNOTE ATTRIBUTES                        -->
<!--                    Attribute list for Footnote element        -->
<!ENTITY % fn-atts
            "%jats-common-atts;                                       
             fn-type    CDATA                             #IMPLIED
             specific-use
                        CDATA                             #IMPLIED
             xml:lang   NMTOKEN                           #IMPLIED"  >


<!--                    INLINE GRAPHIC ATTRIBUTES                  -->
<!--                    Attributes for Inline Graphic
                        <inline-graphic>                           -->
<!ENTITY % inline-graphic-atts
            "%jats-common-atts;                                       
             baseline-shift
                        CDATA                             #IMPLIED
             mimetype   CDATA                        #FIXED 'image'
             mime-subtype
                        (cgm | gif | jpeg | png | tiff)   #IMPLIED
             specific-use
                        CDATA                             #IMPLIED
             xml:lang   NMTOKEN                           #IMPLIED
             %link-atts;"                                           >


<!--                    DEFAULT LIST CLASS ATTRIBUTES              -->
<!--                    Default attribute lists to be used for most
                        of the types of lists. Used for the <list>
                        element and <def-list> element.            -->
<!ENTITY % list-atts
            "%jats-common-atts;                                       
             continued-from
                        IDREF                             #IMPLIED
             list-type  (%list-types;)                    #IMPLIED
             prefix-word
                        CDATA                             #IMPLIED
             list-content
                        CDATA                             #IMPLIED
             specific-use
                        CDATA                             #IMPLIED
             xml:lang   NMTOKEN                           #IMPLIED"  >



<!--                    PERSON GROUP ATTRIBUTES                    -->
<!--                    Attributes for the <person-group> element  -->
<!ENTITY % person-group-atts
            "%jats-common-atts;                                       
             person-group-type
                        CDATA                             #IMPLIED
             specific-use
                        CDATA                             #IMPLIED
             xml:lang   NMTOKEN                           #IMPLIED"  >


<!--                    SECTION ATTRIBUTES                         -->
<!--                    Attributes for the <sec> element           -->
<!ENTITY % sec-atts
            "%jats-common-atts;                                       
             sec-type   CDATA                             #IMPLIED
             specific-use
                        CDATA                             #IMPLIED
             xml:lang   NMTOKEN                           #IMPLIED"  >


<!--                    UNDERLINE ATTRIBUTES                       -->
<!--                    Attributes for the <underline> element     -->
<!ENTITY % underline-atts
            "%jats-common-atts;                                       
             toggle     (yes | no)                        #IMPLIED
             specific-use
                        CDATA                             #IMPLIED" >


<!-- ================== End Authoring Over-ride Content/ATTLIST == -->
